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--- 4dn:phase1:nofic_steering_committee:nofic_aics_workgroup [2019/02/15 09:34]
oh
+++ 4dn:phase1:nofic_steering_committee:nofic_aics_workgroup [2025/04/22 16:21] (current)
@@ Line 1: / Line 1: @@
 ====== NOFIC-AICS Workgroup ======
-[[https://docs.google.com/document/d/1N_B3sLSS8YPEuS1uWcJ73ftC-R5IibRJOSIET24M2-Y/edit|Overview of the project]]
+  * [[https://docs.google.com/document/d/1N_B3sLSS8YPEuS1uWcJ73ftC-R5IibRJOSIET24M2-Y/edit|Overview of the project]]
-[[https://www.google.com/url?q=https://data.4dnucleome.org/4DN-AICS-Collaboration&sa=D&sntz=1&usg=AFQjCNFRrUxdlnTd2GK8rFJuG6VgWFKgXw|Landing page at the 4DN portal]]
+  * [[https://www.google.com/url?q=https://data.4dnucleome.org/4DN-AICS-Collaboration&sa=D&sntz=1&usg=AFQjCNFRrUxdlnTd2GK8rFJuG6VgWFKgXw|Landing page at the 4DN portal]]
-[[https://www.google.com/url?q=https://www.allencell.org/&sa=D&sntz=1&usg=AFQjCNF-fgdKEWHs1hjzSsjzy9M5exrs1A|Allen Cell Explorer]]
+  * [[4dn:phase1:nofic_steering_committee:analysis_products|Wiki page for posting analysis products]]
-[[https://drive.google.com/file/d/0B1Uh14Y8H75dWVBBMVVqNDc3WTBjZmROcUo3UEI4d1RxakY4/view?usp=sharing|AICS CELL LINES (OVERVIEW FOR 4DN) PDF]]
+  * [[https://www.google.com/url?q=https://www.allencell.org/&sa=D&sntz=1&usg=AFQjCNF-fgdKEWHs1hjzSsjzy9M5exrs1A|Allen Cell Explorer]]
+  * [[https://drive.google.com/file/d/0B1Uh14Y8H75dWVBBMVVqNDc3WTBjZmROcUo3UEI4d1RxakY4/view?usp=sharing|AICS CELL LINES (OVERVIEW FOR 4DN) PDF]]
 NOFIC/AICS Weekly Phone call
-We will have calls 9-10 am Pacific Time on Fridays, according to the following monthly schedule:
+We will have calls 9-10 am Pacific Time on Fridays, on the second and fourth Friday of each month. Call agendas are set and calls are moderated by Bing Ren, Bill Noble, Frank Alber and Susanne Rafelski. Meeting agendas, minutes and action items listed in [[https://drive.google.com/open?id=1UmRE2qf-pxQA70jC_GmxDnjRd2CWb7-UypS-Js6_c_U|this document]].
-  * Week 1: <no call>
+Following are some older documents covering minutes from previous calls
-  * Week 2: Data generation subgroup (led Bing Ren and Susanne Rafelski)
-  * Week 3: Data analysis subgroup (led by Bill Noble and Frank Alber)
-  * Week 4: Combined call (led by Bing Ren and Bill Noble)
-Meeting agendas, minutes and action items:
+  * [[https://drive.google.com/open?id=1Fgb9MPIqmFE-VAEQ6L3bspl6l0DSr7-xeCXe9KtFNIc|Data generation]]
-  * [[https://drive.google.com/open?id=1Fgb9MPIqmFE-VAEQ6L3bspl6l0DSr7-xeCXe9KtFNIc|Data generation (2nd Friday)]]
+  * [[https://drive.google.com/open?id=1aTX4VRIxSabUkScOoWcxOw4jM0NT3I1TJjVzAV51CmA|Data analysis]]
-  * [[https://drive.google.com/open?id=1aTX4VRIxSabUkScOoWcxOw4jM0NT3I1TJjVzAV51CmA|Data analysis (3rd Friday)]]
-  * [[https://drive.google.com/open?id=1UmRE2qf-pxQA70jC_GmxDnjRd2CWb7-UypS-Js6_c_U|Combined call (4th Friday)]]
-[[https://drive.google.com/open?id=1n_z4LV66mpbd9HKFuIYjVbaln80oXmiSdeWFO5gUP88|NOFIC-AICS Meeting attendance spreadsheet]]
+  * [[https://drive.google.com/open?id=1n_z4LV66mpbd9HKFuIYjVbaln80oXmiSdeWFO5gUP88|NOFIC-AICS Meeting attendance spreadsheet]]
+===== Cell lines =====
+Two WTC-11 derived cell clones will be used as control for data production in the collaborative project. The two clonal lines are available from Coriell as AICS-0036-006 and AICS-0036-028. The links are:
+[[https://www.coriell.org/0/Sections/Collections/AllenCellCollection/CellLines.aspx?PgId;483|https://www.coriell.org/0/Sections/Collections/AllenCellCollection/CellLines.aspx?PgId;483]]
+The SOP to culture these cells is described in the video here:
+[[https://4dnucleome.webex.com/mw3300/mywebex/nbrshared.do|https://4dnucleome.webex.com/mw3300/mywebex/nbrshared.do]]
 ===== WEBEX WEEKLY CALL SCHEDULE =====
@@ Line 30: / Line 37: @@
 <font 20px/inherit;;inherit;;inherit>__**2nd Friday of every month**__</font>
-<font 20px/inherit;;inherit;;inherit>**NOFIC-AICS MEETING (DATA GENERATION SUBGROUP)**</font>
+<font 20px/inherit;;inherit;;inherit>**NOFIC-AICS MEETING **</font>
 <font 20px/inherit;;#e74c3c;;inherit>//Recurrence: The **2nd Friday of every month**, from Friday, November 9, 2018, to no end date, 9am PT (12pm ET)//</font>
@@ Line 46: / Line 53: @@
 **Access code:**  808 204 266
-__<font 20px/inherit;;inherit;;inherit>**Every 3rd Friday of every month**</font>__
+<font 20px/inherit;;inherit;;inherit>**__Every 4th Friday of every month__ **</font>
-<font 20px/inherit;;inherit;;inherit>**NOFIC-AICS MEETING (DATA ANALYSIS SUBGROUP)**</font>
+<font 20px/inherit;;inherit;;inherit>**NOFIC-AICS MEETING**</font>
-<font 20px/inherit;;#e74c3c;;inherit>//Recurrence: The **3rd Friday of every month**, from Friday, November 16, 2018, to no end date, 9am PT (12pm ET)//</font>
-**Meeting number:**  284 368 029
-**Meeting password:**  s3C8kvvx
-**Meeting link:** [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/j.php?MTID=mcc90a03f2c79e804432e9392f5668808&sa=D&sntz=1&usg=AFQjCNEc1CoW9QamfatiDTRDlFDVe9Vx_g|https://4dnucleome.webex.com/4dnucleome/j.php?MTID=mcc90a03f2c79e804432e9392f5668808]]
-**Host key:**  523175
-**Audio connection:**  +1-415-655-0002 US Toll
-**Access code:**  284 368 029
-<font 20px/inherit;;inherit;;inherit>**__Every 4th Friday of every month__**</font>
-<font 20px/inherit;;inherit;;inherit>**NOFIC-AICS MEETING (COMBINED CALL)**</font>
 <font 20px/inherit;;#e74c3c;;inherit>//Recurrence: The **4th Friday of every month**, from Friday, November 23, 2018, to no end date, 9am PT (12pm ET)//</font>
@@ Line 81: / Line 70: @@
 **Access code:**  285 996 472
+----
+{{medialist>4dn:nofic_steering_committee:nofic_aics_workgroup:}}

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