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4dn:phase2:working_groups:imaging:genomic_single_molecule_localization_data_formats
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4dn:phase2:working_groups:imaging:genomic_single_molecule_localization_data_formats [2021/07/07 09:58] oh |
4dn:phase2:working_groups:imaging:genomic_single_molecule_localization_data_formats [2025/04/22 16:21] (current) |
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| - | ====== Genomic Single-Molecule Localization Data Formats (GSML data formats) ====== | + | ====== Genomic Single-Molecule Localization Data Formats ====== |
| - | **Point people/organizers:** //Sarah Aufmkolk, Joshua Moore, Nicola Neretti, Caterina Strambio De Castilla// | + | This sub-group has now been merged with the [[https://wiki.4dnucleome.org/4dn:phase2:working_groups:imaging:imaging_omics_exchange_data_formats|ImagingOmics Exchange Data Formats ]]sub-group of the Imaging Working Group. |
| - | <font inherit/inherit;;#c0392b;;inherit>**4DN Google Drive folder:**</font> | + | **Point people/organizers:** //Sarah Aufmkolk, Alistair Boettiger, Joshua Moore, Nicola Neretti, Caterina Strambio De Castilla// |
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| + | <font inherit/inherit;;#c0392b;;inherit>**4DN Google Drive folder: ** [[https://drive.google.com/drive/folders/1a7nPmVc2pfIy3TuHz-SVgZ4YdFrxr3je?usp=sharing|https://drive.google.com/drive/folders/1a7nPmVc2pfIy3TuHz-SVgZ4YdFrxr3je?usp=sharing]]</font> | ||
| **<font inherit/inherit;;#c0392b;;inherit>4DN Calendar:</font> ** [[https://wiki.4dnucleome.org/4dn:calendar_4dn|https://wiki.4dnucleome.org/4dn:calendar_4dn]] | **<font inherit/inherit;;#c0392b;;inherit>4DN Calendar:</font> ** [[https://wiki.4dnucleome.org/4dn:calendar_4dn|https://wiki.4dnucleome.org/4dn:calendar_4dn]] | ||
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| <font inherit/inherit;;#c0392b;;inherit>**Meeting attendee spreadsheet: ** [[https://docs.google.com/spreadsheets/d/1ZMDy-LT6rcRS_kmSqfA07Fja469NNpyjWHqCQnTX_90/edit?usp=sharing|https://docs.google.com/spreadsheets/d/1ZMDy-LT6rcRS_kmSqfA07Fja469NNpyjWHqCQnTX_90/edit?usp=sharing]]</font> | <font inherit/inherit;;#c0392b;;inherit>**Meeting attendee spreadsheet: ** [[https://docs.google.com/spreadsheets/d/1ZMDy-LT6rcRS_kmSqfA07Fja469NNpyjWHqCQnTX_90/edit?usp=sharing|https://docs.google.com/spreadsheets/d/1ZMDy-LT6rcRS_kmSqfA07Fja469NNpyjWHqCQnTX_90/edit?usp=sharing]]</font> | ||
| - | <font inherit/inherit;;#c0392b;;inherit>**Email list: **</font> | + | <font inherit/inherit;;#c0392b;;inherit>**Email list: **</font>[[image@4dnucleome.org|]] |
| <font inherit/inherit;;#c0392b;;inherit>**Slack channel: **</font> | <font inherit/inherit;;#c0392b;;inherit>**Slack channel: **</font> | ||
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| This effort will be organized in close alliance with the Open Microscopy Environment consortium and the 4DN data repository. | This effort will be organized in close alliance with the Open Microscopy Environment consortium and the 4DN data repository. | ||
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| + | ===== Output ===== | ||
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| + | ==== FISH Omics Format for Chromating Tracing (FOF-CT) ==== | ||
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| + | The first output of this sub-group is the proposed FISH Omics Format for Chromating Tracing (FOF-CT). We encourage the community to provide feedback ahead to approval from the November Steering Committee meeting. The format is available for comments in two versions: | ||
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| + | - [[https://docs.google.com/document/d/1z7rIYsQnbeS7y_SMuwoa8qsWKBD_BpV88vR79WiH_XI/edit?usp=sharing|General description]] | ||
| + | - [[https://docs.google.com/spreadsheets/d/1GvqokS5w8Yw2tAngsqDC8YcLdRha5cGr/edit?usp=sharing&ouid=101141664079197066125&rtpof=true&sd=true|Specifications]] | ||
4dn/phase2/working_groups/imaging/genomic_single_molecule_localization_data_formats.1625677087.txt.gz · Last modified: 2025/04/22 16:21 (external edit)