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4dn:phase2:working_groups:predictive_modeling_mechanisms [2021/01/07 13:01] oh |
4dn:phase2:working_groups:predictive_modeling_mechanisms [2025/04/22 16:21] (current) |
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====== Predictive Modeling/Models and Mechanisms ====== | ====== Predictive Modeling/Models and Mechanisms ====== | ||
- | **Point people/organizers: //Jian Ma, Katie Pollard, Christina Leslie, Yun Li// ** | + | **Point people/organizers: **//Jian Ma, Katie Pollard, Christina Leslie, Yun Li// |
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+ | <font inherit/inherit;;#c0392b;;inherit>**4DN Google Drive folder:**</font> [[https://drive.google.com/drive/folders/1Oz_B2nwooMguqO8yKCoKVV2hhxek29C6?usp=sharing|https://drive.google.com/drive/folders/1Oz_B2nwooMguqO8yKCoKVV2hhxek29C6?usp=sharing]] | ||
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+ | <font inherit/inherit;;#c0392b;;inherit>**4DN Calendar: **</font>[[https://wiki.4dnucleome.org/4dn:calendar_4dn|https://wiki.4dnucleome.org/4dn:calendar_4dn]] ([[https://ics.teamup.com/feed/ksrqw1wb728dtrxdvg/9148079.ics|click here]] to add this specific WG calendar to your personal calendar) | ||
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+ | **<font inherit/inherit;;#c0392b;;inherit>Agenda/minutes:</font>** [[https://docs.google.com/document/d/1jLAWlUDayZcxhVWbN2DiDlKulkNLoCJsy93n95swkRY/edit?usp=sharing|https://docs.google.com/document/d/1jLAWlUDayZcxhVWbN2DiDlKulkNLoCJsy93n95swkRY/edit?usp=sharing]] | ||
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+ | **<font inherit/inherit;;#c0392b;;inherit>Meeting attendee spreadsheet:</font> ** [[https://docs.google.com/spreadsheets/d/18MXxoUPHPNd4yz440NMXx9-feo6zI2C0mlnM40vMjtg/edit?usp=sharing|https://docs.google.com/spreadsheets/d/18MXxoUPHPNd4yz440NMXx9-feo6zI2C0mlnM40vMjtg/edit?usp=sharing]] | ||
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+ | **<font inherit/inherit;;#c0392b;;inherit>Collaboration document:</font> ** [[https://docs.google.com/document/d/1eRQQWrEQJkmPEOp2y2n-QeKKexCB6nHqVBFCsTCgsc0/edit?usp=sharing|https://docs.google.com/document/d/1eRQQWrEQJkmPEOp2y2n-QeKKexCB6nHqVBFCsTCgsc0/edit?usp=sharing]] | ||
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+ | <font inherit/inherit;;#c0392b;;inherit>**Email list:**</font> <model-mechanism@4dnucleome.org> | ||
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+ | <font inherit/inherit;;#c0392b;;inherit>**Slack channel:**</font> #wg-predictive-modeling | ||
===== Mission Statement ===== | ===== Mission Statement ===== | ||
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* Interpreting the cell type-specific impact of genetic variants on nuclear structure and function, with additional integration with medical genetics datasets in health and diseases | * Interpreting the cell type-specific impact of genetic variants on nuclear structure and function, with additional integration with medical genetics datasets in health and diseases | ||
* Assessing the phenotypic impact of 3D genome organization at various levels (i.e., molecular, cellular, and organism) | * Assessing the phenotypic impact of 3D genome organization at various levels (i.e., molecular, cellular, and organism) | ||
- | * Benchmark loci and datasets for experimental validations | + | * Benchmark loci and datasets for experimental validations |
* **Predictive models for multiscale navigable 4D Nucleome maps to reveal nuclear organization mechanisms** | * **Predictive models for multiscale navigable 4D Nucleome maps to reveal nuclear organization mechanisms** | ||
* Integration of multimodal datasets, including genomic assays and imaging methods | * Integration of multimodal datasets, including genomic assays and imaging methods |