https://wiki.4dnucleome.org/ 2026-04-18T22:52:53-0700 https://wiki.4dnucleome.org/ https://wiki.4dnucleome.org/_media/wiki:favicon.ico text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:4dn_cell_repository?rev=1745364087&do=diff Copy of the consent letter for Phase II PIs Updated agreement/PO with Coriell (9.22.2021) Sample Institutional Certification Form for Public sharing of data from specimens collected before January 15, 2015 that lack consent NIH page of FAQs for Genomic Data Sharing Policy (EXAMPLE) Florida State University RESEARCH COMPLIANCE page Readers Digest List of MTA Conditions Condensed by the OH Cell lines WG wiki page biosample metadata page * WICell Ordering Process [WA01 (H… text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:4dn_cell_repository1?rev=1745364087&do=diff 4DN Cell Repository This page describes the ordering process for the established cell lines of the 4DN Cell Repository. The established cell lines specifically refer to the cell lines that have been approved by the Cell Line WG, 4DN steering committee, NIH, and have been ordered by OH or created by 4DN appointed groups. text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:4dn_cell_repository_2?rev=1745364087&do=diff 4DN Cell Repository This page describes the ordering process for the established cell lines of the 4DN Cell Repository. The established cell lines specifically refer to the cell lines that have been approved by the Cell Line WG, 4DN steering committee, NIH, and have been ordered by OH or created by 4DN appointed groups. text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:4dn_cell_repository_4?rev=1745364088&do=diff 4DN Cell Repository Availability of Tier 1 cell lines from WiCell, Coriell, and ATCC Eligibility information for PIs who are new to 4DN Cell Repository All current Phase II PIs have been approved by the Phase II 4DN Cells WG to receive a single vial of each of our commercial repository stocked Tier1 cell lines, including: H1 (WiCell), GM12878 (Coriell), and IMR90 (ATCC). Additional vials will require separate approval from the Cells WG. text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:4dn_cell_repository_test?rev=1745364088&do=diff 4DN Cell Repository This page describes the ordering process for the established cell lines of the 4DN Cell Repository. The established cell lines specifically refer to the cell lines that have been approved by the Cell Line WG, 4DN steering committee, NIH, and have been ordered by OH or created by 4DN appointed groups. text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:2020_kick_off?rev=1745364087&do=diff 2020 4DN Phase II Virtual Kick-off Meeting The 2020 4DN Phase II Kick-off Meeting is open to 4DN Phase II funded members only (RFA-RM-20-XXX). Final Agenda Final Agenda with links to video presentations Kickoff Meeting Report Meeting survey results Here are some essential information for attendees to prepare your presentations: * Presentation time. Each research center and project will be allocated 10 minutes of time. (8 minutes presentation, 2 minutes for Q and A). The organizatio… text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:2021_annual_meeting?rev=1745364087&do=diff 4DN ANNUAL MEETING (VIRTUAL) December 8-10, 2021 (8am - 2pm PST) Planning Committee Chairs and Co-Chairs: Ana Pombo, Sheng Zhong, Carl Wu, Geeta Narlikar, Ian Fingerman, Christina Leslie, Christine Disteche, Frank Alber, Jian Ma, Job Dekker, Judy Mietz, Lacra Bintu, Mike Pazin, Olivier Blondel, Rene Maehr, Susanne Rafelski, Yin Shen text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:2022_annual_meeting?rev=1745364087&do=diff 2022 4DN Annual Meeting 2022 4D Nucleome Annual Meeting December 7-9, 2022 8:00am - 7:00pm Marriot Marquis San Diego Marina Hotel Hotel floor map (Updated 10.7.22) Hotel Master Packet Program agenda Agenda Google Sheet (please do NOT edit without consulting with the organizational hub, email: oh@4dnucleome.org) Poster Booklet (including poster map and poster list) text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:2023_annual_meeting?rev=1745364087&do=diff 2023 4DN Annual Meeting 2023 4D Nucleome Annual Meeting December 9-11, 2023 8:00am - 7:00pm Boston Park Plaza Hotel floor map Hotel floor plan Hotel Event Space Images Hotel Master Packet Program agenda Agenda Google Sheet (please do NOT edit without consulting with the organizational hub, email: oh@4dnucleome.org) Poster Map Poster Abstracts CODE OF CONDUCT ---------- text/html 2025-04-22T16:21:27-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:2024_annual_meeting?rev=1745364087&do=diff 2024 4DN ANNUAL MEETING WYNDHAM SAN DIEGO BAYSIDE HOTEL SAN DIEGO, CA DECEMBER 11-13, 2024 (Pre-registration and guest arrival date: December 10, 2024) More information to follow! Please check your emails. “Invitation letter: We are happy to provide registered participants with invitation letters to assist your visa application. Please contact text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:associate_members?rev=1745364088&do=diff Associate Member Application and Letters of Intent https://docs.google.com/spreadsheets/d/1aUsUkypUiSu2uWHTKI3Hf5JRoiiMbXRMbnHqVmz7RYI/edit text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:collaboration_plaza?rev=1745364088&do=diff Collaboration Plaza This is a page dedicated to 4DN members seeking collaboration opportunities among the network. * If your project would need some help in methods / technologies, you may post in “Help wanted” by stating your question and requirements so that other researchers may fill in. text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:interest_groups?rev=1745364088&do=diff Interest groups See all the interest groups in the navigation sidebar. text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:job_opportunities?rev=1745364088&do=diff Job Opportunities Welcome to the Job Opportunities page! Positions currently available are listed on this page as well as NIH Funding opportunities/initiatives. Please use the following button to add a new job opportunity entry. //forms.gle/vZqervrJYnYKTHVB7 Note: it may take a while (up to 15 minutes) for any newly created job opportunity entry to appear in the list below. text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:manuscript_tracking?rev=1745364088&do=diff Manuscript Tracking Preprints on bioRxiv The bioRxiv has created a channel for our preprints, which can be accessed here: https://connect.biorxiv.org/relate/content/66. The content of the channel is manually curated. If you notice that one of your preprints is missing or incorrectly assigned to the list, please contact OH at text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:meetings_and_committees?rev=1745364088&do=diff Meetings in 4DN Phase 2 * 2024 Annual Meeting: December 11-13, 2024 * 2023 Annual Meeting: December 9-11, 2023 * 2022 Annual Meeting: December 7-9, 2022 * 2021 Annual Meeting: Dec 8-10, 2021 * 2020 Kickoff meeting: Dec 2-4, 2020 text/html 2025-08-22T08:04:04-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:scientific_webinar?rev=1755875044&do=diff Scientific Webinar https://drive.google.com/drive/folders/1Q1mzBETKDLLnMviloMVGCieBNNqKbP36?usp=sharing click here to add all the Scientific Webinar events to your personal calendar Scientific Webinar Assignments (2021-2025): docs.google.com/spreadsheets/d/122eouLgJtMoCJNKmNhygufdU1qqEy-dDomxqqyQ1TxM/edit?usp=sharing Mission The 4DN Consortium Scientific Webinar Series is designed to promote sharing ideas and establishment of new collaborations among the consortium members. It feature… text/html 2025-08-22T09:33:59-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:scientific_webinar_archive?rev=1755880439&do=diff Scientific Webinar Archive (Phase 2) Click the link to see archived announcements 2025 January 24, 2025 February 28, 2025 March 28, 2025 April 25, 2025 May 23, 2025 June 27, 2025 July 25, 2025 August 22, 2025 2024 January 26, 2024 February 23, 2024 March 22, 2024 April 26, 2024 May 24, 2024 June 28, 2024 July 26, 2024 August 23, 2024 September 27, 2024 October 25, 2024 2023 January 27, 2023 February 24, 2023 March 24, 2023 April 28, 2023 May 26, 2023 June 23, 2023 … text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:shared_missions?rev=1745364088&do=diff 4DN Phase II Shared Missions * Google Drive folder * 2021 4DN Annual Meeting breakout discussions and summary * Email: <phase2collaborativemission@4dnucleome.org> Investigators who have already volunteered (as of 2/14/2022): * * * * * * * * * * * Bing Ren * Xiangmin Xu * Vijay Ramani * Bill Noble * Yarui Diao * Christine Disteche text/html 2025-05-20T08:14:51-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:steering_committee?rev=1747754091&do=diff Steering Committee Co-chairs: Jian Ma (replaced William Noble after September), Geeta Narlikar, Ana Pombo SC Voting Members: Olivier Blondel, Job Dekker, Andrew Belmont, Bing Ren, Jay Shendure, Peter Park and Sheng Zhong NIH: Olivier Blondel, Ian Fingerman, Mike Pazin text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:test_page_2?rev=1745364088&do=diff Put a title old next update text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:working_groups?rev=1745364088&do=diff Working groups See all the working groups and subgroups in the navigation sidebar. text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:wtc11_resources?rev=1745364088&do=diff WTC11 Resources Landing page at the 4DN Data Portal: https://data.4dnucleome.org/4DN-AICS-Collaboration JAWG page (ENCODE data): https://data.4dnucleome.org/joint-analysis Phase 1 Cells WG Google Group for tools: https://groups.google.com/a/4dnucleome.org/g/4dn-cell-eng