https://wiki.4dnucleome.org/ 2026-04-18T22:56:02-0700 https://wiki.4dnucleome.org/ https://wiki.4dnucleome.org/_media/wiki:favicon.ico text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:working_groups:imaging:fish_omics_exchange_data_formats?rev=1745364088&do=diff FISH OMICS EXCHANGE DATA FORMATS SUBGROUP (This group emerged from the merging of the two previously existing GSML and IOEDF IWG subgroups. The wiki pages of the two subgroups were merged on 11.18.21) Point people/organizers: Sarah Aufmkolk, Alistair Boettiger, Josh Moore, Nicola Neretti, Caterina Strambio-De-Castilla, Steve Wang text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:working_groups:imaging:fish_omics_standards?rev=1745364088&do=diff Lead: Alistair Boettiger, Steve Wang (alphabetic order). Mission statement: This sub-group will develop recommended data formats and metadata specifications for sharing 3D chromatin folding traces obtained from multiplexed DNA FISH and other in-situ imaging-based omics approaches, with the flexibility to include additional multi-omic imaging data to be mapped to these structural data, such as RNA expression, protein distribution, cell morphology, or tissue coordinates. text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:working_groups:imaging:genomic_single_molecule_localization_data_formats?rev=1745364088&do=diff Genomic Single-Molecule Localization Data Formats This sub-group has now been merged with the ImagingOmics Exchange Data Formats sub-group of the Imaging Working Group. Point people/organizers: Sarah Aufmkolk, Alistair Boettiger, Joshua Moore, Nicola Neretti, Caterina Strambio De Castilla text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:working_groups:imaging:image_data_documentation_submission?rev=1745364088&do=diff Imaging data documentation, QC, and submission Point people/organizers: Caterina Strambio De Castillia, Andrea Cosolo, Andrew Schroder 4DN Google Drive folder: https://drive.google.com/drive/folders/14az_BZbkWt0LzZh-x29QrRtXJ2-SJEMV?usp=sharing https://wiki.4dnucleome.org/4dn:calendar_4dn Agenda/Minutes: https://docs.google.com/document/d/1Q32qoIate7Gtm_WdoNFtYttcECZivJaHPzn8MBm2YKw/edit?usp=sharing Meeting attendee spreadsheet: https://docs.google.com/spreadsheets/d/14mxH_94Md8YXdNl5P-c… text/html 2025-04-22T16:21:28-0700 Anonymous (anonymous@undisclosed.example.com) https://wiki.4dnucleome.org/4dn:phase2:working_groups:imaging:imaging_omics_exchange_data_formats?rev=1745364088&do=diff ImagingOmics: Exchange formats for genomic imaging results This sub-group has now been merged with the Genomic Single-Molecule Localization Data Formats sub-group of the Imaging Working Group. Point people/organizers: Alistair Boettiger, Steve Wang 4DN Google Drive folder: https://drive.google.com/drive/folders/1Rzn7_U_Id81LIHdu0ECcQ5Wc7sBLTqvW?usp=sharing https://wiki.4dnucleome.org/4dn:calendar_4dn Agenda/Minutes: