4D Nucleome Network Wiki

September 27, 2019

Presenter: Joshua Riback (Princeton University) - “Composition dependent phase separation underlies directional flux through the nucleolus” (Link to presenter slides)

Presenter: Jian Ma (School of Computer Science at Carnegie Mellon University) - “Multimodal, interactive data visualization and exploration for the 4D Nucleome” (Link to presenter slides)

Previous Scientific Webinar presentations can be downloaded from the Scientific Webinar presentation archive page linked here.

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8:00-8:20 am Pacific Time , 20 minutes talk, then 10 minutes Q&A

Joshua Riback

Postdoctoral Fellow

jriback@princeton.edu

Title: “Composition dependent phase separation underlies directional flux through the nucleolus”

Josh received a Bachelor’s in Biophysics at Johns Hopkins University. He obtained a PhD in the Biophysical Sciences at the University of Chicago, co-mentored by Drs. Tobin Sosnick and D. Allan Drummond, on the connection between the extent of collapse (or lack thereof) of intrinsically disordered regions/proteins and biochemical and cellular phenomena including phase separation, protein (mis-)folding/aggregation, and cellular fitness. He joined Cliff as a postdoc with the goal to apply biophysical chemistry, widely utilized in the protein folding community, in the rapidly emerging field focused around liquid-liquid phase separated organelles. Toward this end, he has begun elucidating the thermodynamic principles underlying endogenous phase separation and bridging these principles with condensate function.

8:30-8:50 am Pacific Time , 20 minutes talk, then 10 minutes Q&A

Jian Ma

Associate Professor

jianma@cs.cmu.edu

Title: “Multimodal, interactive data visualization and exploration for the 4D Nucleome”

Jian Ma is an Associate Professor in the School of Computer Science at Carnegie Mellon University. He is a faculty member in the Computational Biology Department with additional appointment in the Machine Learning Department at CMU. The work in his lab is primarily focused on algorithm development to study genome structure and function with recent interests in nuclear genome organization, gene regulation, comparative genomics, and single cell biology. https://www.cs.cmu.edu/~jianma/

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The 4th Friday of every month, from Friday, January 26, 2018, to no end date
8:00 am | Pacific Daylight Time (San Francisco, GMT-07:00) | 1 hr

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3. Participants can find the Scientific Webinar slides presentations above under Scientific Webinar Series slides presentations.

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When: October 25, 2019

Moderated by: Bing Ren

Member from Peter Fraser (contact), Amos Tanay's group (Presenter to be determined)

Member from Larry Gerace's group (Jian Ma presenter)

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