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4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive [2021/02/26 09:03] rcalandrelli |
4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive [2025/04/22 16:21] (current) |
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| - | ====== Scientific Webinar Presentation Archive ====== | + | ====== Scientific Webinar Archive (Phase 1) ====== |
| - | + | ||
| - | ===== 2021 ===== | + | |
| - | + | ||
| - | February 26, 2021 Click to see archived announcements | + | |
| - | + | ||
| - | Presenter: Kyu Young Han (CREOL, The College of Optics and Photonics)** - **“2.5D microscopy: Fast, high-throughput imaging via volumetric projection for quantitative subcellular analysis” ([[https://drive.google.com/file/d/1MQeA-ttMyTWPx28z-tKd8hkmbkEv6YTt/view?usp=sharing|Link to presenter slides]]) | + | |
| - | + | ||
| - | Presenter: Tonia Hafner (Stanford University) - “ Imaging the genome unfolding” ([[https://drive.google.com/file/d/1wrTH-55bpMVijfzEJJ5AK_RWB2IjoYTk/view?usp=sharing|Link to presenter slides]]) | + | |
| ===== 2020 ===== | ===== 2020 ===== | ||
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| Presenter: Charles Danko (Cornell University) - “Focal enhancer-promoter loops: Fact or Fiction” ([[https://drive.google.com/file/d/1ybYqo3Cuy6Mox_VhAVW6G43oZI-_GBK0/view?usp=sharing|Link to presenter slides]]) | Presenter: Charles Danko (Cornell University) - “Focal enhancer-promoter loops: Fact or Fiction” ([[https://drive.google.com/file/d/1ybYqo3Cuy6Mox_VhAVW6G43oZI-_GBK0/view?usp=sharing|Link to presenter slides]]) | ||
| - | * May 22, 2020 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:scientific_webinar_series:scientific_webinar_presentation_archive:May+2020|Click to see archived announcements]] | + | * May 22, 2020 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:May+2020|Click to see archived announcements]] |
| Presenter: Minji Kim (Jackson Laboratory) - “Chromatin folding dynamics in loop extrusion” ([[https://drive.google.com/file/d/1UjC3gXRCdKcMcbte88W0z4nKF0NZetk2/view|Link to presenter slides]]) | Presenter: Minji Kim (Jackson Laboratory) - “Chromatin folding dynamics in loop extrusion” ([[https://drive.google.com/file/d/1UjC3gXRCdKcMcbte88W0z4nKF0NZetk2/view|Link to presenter slides]]) | ||
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| Presenter: Giancarlo Bonora (University of Washington) - “A time course multi-omics study of early mouse development at the single cell level” ([[https://r.pblc.it/c/149916561?alt_obj=cta&method=email&url=https%3A%2F%2Fdrive.google.com%2Ffile%2Fd%2F1HOMXlYBBnYPkqi_arEMxN9Lj2EpDXft7%2Fview%3Fusp%3Dsharing|Link to presenter slides]]) | Presenter: Giancarlo Bonora (University of Washington) - “A time course multi-omics study of early mouse development at the single cell level” ([[https://r.pblc.it/c/149916561?alt_obj=cta&method=email&url=https%3A%2F%2Fdrive.google.com%2Ffile%2Fd%2F1HOMXlYBBnYPkqi_arEMxN9Lj2EpDXft7%2Fview%3Fusp%3Dsharing|Link to presenter slides]]) | ||
| - | * April 24, 2020 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:scientific_webinar_series:scientific_webinar_presentation_archive:March+27,+2020|Click to see archived announcements]] | + | * April 24, 2020 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:March+27,+2020|Click to see archived announcements]] |
| Presenter: Kami Ahmad (Fred Hutchinson Cancer Research Center) - “CUT&RUN and CUT&Tag methods for profiling chromatin marks and chromatin structure.” ([[https://drive.google.com/open?id=19PcUyuA3OTCKk8WpNQm_5Y5rcAm7Lki_|Link to presenter slides]]) | Presenter: Kami Ahmad (Fred Hutchinson Cancer Research Center) - “CUT&RUN and CUT&Tag methods for profiling chromatin marks and chromatin structure.” ([[https://drive.google.com/open?id=19PcUyuA3OTCKk8WpNQm_5Y5rcAm7Lki_|Link to presenter slides]]) | ||
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| * <font inherit/inherit;;#c0392b;;inherit>**March 27, 2020 - CANCELLED**</font> | * <font inherit/inherit;;#c0392b;;inherit>**March 27, 2020 - CANCELLED**</font> | ||
| - | * February 28, 2020 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:scientific_webinar_series:scientific_webinar_presentation_archive:February+28,+2020|Click to see archived announcements]] | + | * February 28, 2020 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:February+28,+2020|Click to see archived announcements]] |
| Presenter: Brian Glenn St Hilaire (Baylor College of Medicine) - “ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL” ([[https://drive.google.com/open?id=1dXfMhllYePiJbT-ly6GguRX6wbC32qwN|Link to presenter slides]]) | Presenter: Brian Glenn St Hilaire (Baylor College of Medicine) - “ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL” ([[https://drive.google.com/open?id=1dXfMhllYePiJbT-ly6GguRX6wbC32qwN|Link to presenter slides]]) | ||
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| Presenter: Lisa Bashkirova (Columbia University) - “Nuclear architecture regulates the anatomic pattern of olfactory receptor expression in the olfactory epithelium” ([[https://drive.google.com/open?id=1iGvehhPO2Cjkqiry4z-Aw4bHEOLDDCU8|Link to presenter slides]]) | Presenter: Lisa Bashkirova (Columbia University) - “Nuclear architecture regulates the anatomic pattern of olfactory receptor expression in the olfactory epithelium” ([[https://drive.google.com/open?id=1iGvehhPO2Cjkqiry4z-Aw4bHEOLDDCU8|Link to presenter slides]]) | ||
| - | * January 24, 2020 [[https://wiki.4dnucleome.org/4dn:scientific_webinar_series:scientific_webinar_presentation_archive:january_24_2020|Click to see archived announcements]] | + | * January 24, 2020 [[https://wiki.4dnucleome.org/4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:january_24_2020|Click to see archived announcements]] |
| Presenter: Leo Barinov (Princeton University) - “Interplay between chromatin organization and transcriptional activity” ([[https://mail.google.com/mail/u/0?ui=2&ik=ed374f079d&attid=0.1&permmsgid=msg-f:1656623559131554208&th=16fd8259909461a0&view=att&disp=inline|Link to presenter slides]]) | Presenter: Leo Barinov (Princeton University) - “Interplay between chromatin organization and transcriptional activity” ([[https://mail.google.com/mail/u/0?ui=2&ik=ed374f079d&attid=0.1&permmsgid=msg-f:1656623559131554208&th=16fd8259909461a0&view=att&disp=inline|Link to presenter slides]]) | ||
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| ===== 2019 ===== | ===== 2019 ===== | ||
| - | * October 25, 2019 [[https://wiki.4dnucleome.org/4dn:scientific_webinar_series:scientific_webinar_presentation_archive:october_25_2019|Click to see archived announcements]] | + | * October 25, 2019 [[https://wiki.4dnucleome.org/4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:october_25_2019|Click to see archived announcements]] |
| Presenter: Nimrod Rappoport (Weizman Institute of Science) - “Single cell Hi-C and dissection of replication landscapes and chromosomal organization in mouse embryonic lineages” [[https://drive.google.com/open?id=0B1Uh14Y8H75dTmFvNXE4a0pzOWlvTm1PWEhHRVctVEh1SUx3|(Link to presenter slides)]] | Presenter: Nimrod Rappoport (Weizman Institute of Science) - “Single cell Hi-C and dissection of replication landscapes and chromosomal organization in mouse embryonic lineages” [[https://drive.google.com/open?id=0B1Uh14Y8H75dTmFvNXE4a0pzOWlvTm1PWEhHRVctVEh1SUx3|(Link to presenter slides)]] | ||
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| Presenter: Kanishk Abhinav (The University of Edinburgh) - “Local environment of inner nuclear membrane proteins analyzed by proximity labeling and mass spectrometry” [[https://drive.google.com/open?id=1oKCrQN4q09PJGjC8pwx-Np_5Qb4S6EHZ|(Link to presenter slides)]] | Presenter: Kanishk Abhinav (The University of Edinburgh) - “Local environment of inner nuclear membrane proteins analyzed by proximity labeling and mass spectrometry” [[https://drive.google.com/open?id=1oKCrQN4q09PJGjC8pwx-Np_5Qb4S6EHZ|(Link to presenter slides)]] | ||
| - | * September 27, 2019 [[https://wiki.4dnucleome.org/4dn:scientific_webinar_series:scientific_webinar_presentation_archive:september_2019|Click to see archived announcements]] | + | * September 27, 2019 [[https://wiki.4dnucleome.org/4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:september_2019|Click to see archived announcements]] |
| Presenter: Joshua Riback (Princeton University) - “Composition dependent phase separation underlies directional flux through the nucleolus” (Link to presenter slides) | Presenter: Joshua Riback (Princeton University) - “Composition dependent phase separation underlies directional flux through the nucleolus” (Link to presenter slides) | ||
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| Presenter: Jian Ma (School of Computer Science at Carnegie Mellon University) - “Multimodal, interactive data visualization and exploration for the 4D Nucleome” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dWE9MVnlBbEM2TFFvNmJHS3pwVjdOUEdkaTVR|Link to presenter slides]]) | Presenter: Jian Ma (School of Computer Science at Carnegie Mellon University) - “Multimodal, interactive data visualization and exploration for the 4D Nucleome” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dWE9MVnlBbEM2TFFvNmJHS3pwVjdOUEdkaTVR|Link to presenter slides]]) | ||
| - | * August 23, 2019 [[https://wiki.4dnucleome.org/4dn:scientific_webinar_series:scientific_webinar_presentation_archive:august_2_2019|Click to see archived announcements]] | + | * August 23, 2019 [[https://wiki.4dnucleome.org/4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:august_2_2019|Click to see archived announcements]] |
| Presenter: Andrew Stephens (Umass Amherst) - “Heterochromatin and HP1alpha provide different nuclear mechanical contributions to maintain nuclear shape and function” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dSmp6a2ZzMkpLaFczR0tmdW1LZEF6bUZqcG5z|Link to presenter slides]]) | Presenter: Andrew Stephens (Umass Amherst) - “Heterochromatin and HP1alpha provide different nuclear mechanical contributions to maintain nuclear shape and function” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dSmp6a2ZzMkpLaFczR0tmdW1LZEF6bUZqcG5z|Link to presenter slides]]) | ||
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| Presenter: Yodai Takei (Caltech) - “Intron seqFISH enables spatial analysis of the nascent transcriptome in single cells” ([[https://drive.google.com/file/d/1y1LA7Ud5a5MQkpgy80P7G332Y6x0A4Ye/view|Link to presenter slides]]) | Presenter: Yodai Takei (Caltech) - “Intron seqFISH enables spatial analysis of the nascent transcriptome in single cells” ([[https://drive.google.com/file/d/1y1LA7Ud5a5MQkpgy80P7G332Y6x0A4Ye/view|Link to presenter slides]]) | ||
| - | * July 26, 2019 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:scientific_webinar_series:scientific_webinar_presentation_archive:July+26,2019|Click to see archived announcements]] | + | * July 26, 2019 [[https://wiki.4dnucleome.org/doku.php?do=edit&id=4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:July+26,2019|Click to see archived announcements]] |
| Presenter: Mary Arrastia (California Institute of Technology) - “Studying the structural organization of subnuclear chromatin compartments through genome structure modeling” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dc1BKbVRlT0NxdklSTnFCMUQtdVZOaXA5ZWJV|Link to presenter slides]]) | Presenter: Mary Arrastia (California Institute of Technology) - “Studying the structural organization of subnuclear chromatin compartments through genome structure modeling” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dc1BKbVRlT0NxdklSTnFCMUQtdVZOaXA5ZWJV|Link to presenter slides]]) | ||
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| Presenter: Yanxiao Zhang (Ludwig Institute for Cancer Research San Diego) - “Transcriptionally Active HERV-H Retrotransposons Demarcate TADs in Human ESCs” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dOWlCaTVlcVlDcnV1YkxaeEw3RTBTTzdTNFdV|Link to presenter slides]]) | Presenter: Yanxiao Zhang (Ludwig Institute for Cancer Research San Diego) - “Transcriptionally Active HERV-H Retrotransposons Demarcate TADs in Human ESCs” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dOWlCaTVlcVlDcnV1YkxaeEw3RTBTTzdTNFdV|Link to presenter slides]]) | ||
| - | * June 28, 2019 [[http://wiki.4dnucleome.org/4dn:scientific_webinar_series:scientific_webinar_presentation_archive:june_28_2019|Click to see archived announcements]] | + | * June 28, 2019 [[http://wiki.4dnucleome.org/4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:june_28_2019|Click to see archived announcements]] |
| Presenter: Asli Yildirim (University of California, Los Angeles) - “Studying the structural organization of subnuclear chromatin compartments through genome structure modeling” ([[https://www.dropbox.com/s/krxxzk6vxnotofn/Asli_Webinar_2019_25min_AY.pdf?dl=0|Link to presenter slides]]) | Presenter: Asli Yildirim (University of California, Los Angeles) - “Studying the structural organization of subnuclear chromatin compartments through genome structure modeling” ([[https://www.dropbox.com/s/krxxzk6vxnotofn/Asli_Webinar_2019_25min_AY.pdf?dl=0|Link to presenter slides]]) | ||
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| Presenter: Anastassiia Vertii (University of Massachusetts Medical School) - “The composition and regulation of nucleolus-associated domains” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dN1YyWk40bm5MOXVZcWx3RHRqVkxDUWZwQXVZ|Link to presenter slides]]) | Presenter: Anastassiia Vertii (University of Massachusetts Medical School) - “The composition and regulation of nucleolus-associated domains” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dN1YyWk40bm5MOXVZcWx3RHRqVkxDUWZwQXVZ|Link to presenter slides]]) | ||
| - | * May 24, 2019 [[https://wiki.4dnucleome.org/4dn:scientific_webinar_series:scientific_webinar_presentation_archive:may_21_2019|Click to see archived announcements]] | + | * May 24, 2019 [[https://wiki.4dnucleome.org/4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:may_21_2019|Click to see archived announcements]] |
| Presenter: Molly Gasperini (University of Washington) - “Pairing enhancers with their target genes via multiplexed cellular genetic screens” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dYWxTV2JVYl9fM3Uyc1Aza0poM3Zzbm1RVnBR|Link to presenter slides]]) | Presenter: Molly Gasperini (University of Washington) - “Pairing enhancers with their target genes via multiplexed cellular genetic screens” ([[https://drive.google.com/open?id=0B1Uh14Y8H75dYWxTV2JVYl9fM3Uyc1Aza0poM3Zzbm1RVnBR|Link to presenter slides]]) | ||
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| Presenter: Mayank NK Choudhary (Washington Univeristy) - “Co-opted transposons help perpetuate conserved higher-order chromosomal structures” ([[https://drive.google.com/open?id=0B1Uh14Y8H75ddXJoSE1aWEZSTGJTUERIWTdQUkNDNkNfVUlN|Link to presenter slides]]) | Presenter: Mayank NK Choudhary (Washington Univeristy) - “Co-opted transposons help perpetuate conserved higher-order chromosomal structures” ([[https://drive.google.com/open?id=0B1Uh14Y8H75ddXJoSE1aWEZSTGJTUERIWTdQUkNDNkNfVUlN|Link to presenter slides]]) | ||
| - | * April 26, 2019 [[https://wiki.4dnucleome.org/4dn:scientific_webinar_series:scientific_webinar_presentation_archive:april_26_2019|Click to see archived announcements]] | + | * April 26, 2019 [[https://wiki.4dnucleome.org/4dn:phase1:scientific_webinar_series:scientific_webinar_presentation_archive:april_26_2019|Click to see archived announcements]] |
| Presenter: Soohyun Lee (Harvard Medical School) - “Reproducible Data Processing at the 4DN Data Coordination and Integration Center” [Link to presenter slides] | Presenter: Soohyun Lee (Harvard Medical School) - “Reproducible Data Processing at the 4DN Data Coordination and Integration Center” [Link to presenter slides] | ||
4dn/phase1/scientific_webinar_series/scientific_webinar_presentation_archive.1614358995.txt.gz · Last modified: 2025/04/22 16:21 (external edit)