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4dn:phase1:working_groups:data_analysis [2019/01/25 14:37] rcalandrelli |
4dn:phase1:working_groups:data_analysis [2025/04/22 16:21] (current) |
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====== Data Analysis ====== | ====== Data Analysis ====== | ||
+ | |||
+ | <font 20px/inherit;;#e74c3c;;inherit>**The mailing list for the working group has been changed. Please use [[analysis@4dnucleome.org]] from now on as the new mailing list address.**</font> | ||
===== Introduction ===== | ===== Introduction ===== | ||
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===== WebEx Meeting Information ===== | ===== WebEx Meeting Information ===== | ||
- | <font 20px/inherit;;inherit;;inherit>**Weekly Call - 4DN JAWG/DAWG Meeting \\ | + | <font 20px/inherit;;inherit;;inherit>**Weekly Call - 4DN JAWG/DAWG Meeting Every Thursday(from March 1, 2018)**</font> |
- | Every Thursday(from March 1, 2018)**</font> | + | |
**1:00-2:00 pm ET (Eastern Time), 10:00-11:00 am PT (Pacific Time) ** | **1:00-2:00 pm ET (Eastern Time), 10:00-11:00 am PT (Pacific Time) ** | ||
- | [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/j.php?MTID=m8ea943b4f866758ce61e412a002a8a95&sa=D&sntz=1&usg=AFQjCNF6uGcS20RnYEw3eNQCt5LdpcpmcQ|Click here to Join WebEx meeting]] \\ | + | [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/j.php?MTID=m8ea943b4f866758ce61e412a002a8a95&sa=D&sntz=1&usg=AFQjCNF6uGcS20RnYEw3eNQCt5LdpcpmcQ|Click here to Join WebEx meeting]]\\ Meeting number: 805 283 801\\ Meeting password: uJe93m63\\ Host key: 347076 |
- | Meeting number: 805 283 801 \\ | + | |
- | Meeting password: uJe93m63 \\ | + | |
- | Host key: 347076 | + | |
- | **Join by phone** \\ | + | **Join by phone**\\ +1-415-655-0002 US Toll |
- | +1-415-655-0002 US Toll | + | |
Access code: 805 283 801 | Access code: 805 283 801 | ||
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<font inherit/inherit;;#2980b9;;inherit>**858-822-1626 (OFFICE)**</font> | <font inherit/inherit;;#2980b9;;inherit>**858-822-1626 (OFFICE)**</font> | ||
- | |||
- | <font inherit/inherit;;#2980b9;;inherit>**619-734-5961 (CELL)**</font> | ||
===== Meetings ===== | ===== Meetings ===== | ||
- | \\ **1/13/2016** | + | \\ **1/13/2016** |
* **Links: ** | * **Links: ** | ||
* [[https://docs.google.com/document/d/1rjYIXarELOkSWwDjsejTeWHotVKIlydGR2XIsI3Nyw4/edit?usp=sharing|google doc page]]. | * [[https://docs.google.com/document/d/1rjYIXarELOkSWwDjsejTeWHotVKIlydGR2XIsI3Nyw4/edit?usp=sharing|google doc page]]. | ||
* [[https://docs.google.com/viewer?a=v&pid=sites&srcid=ZGVmYXVsdGRvbWFpbnw0ZG5kYXdpa2l8Z3g6N2UxYWQ3Nzk0N2U2MTg4NQ|Additional notes]]. | * [[https://docs.google.com/viewer?a=v&pid=sites&srcid=ZGVmYXVsdGRvbWFpbnw0ZG5kYXdpa2l8Z3g6N2UxYWQ3Nzk0N2U2MTg4NQ|Additional notes]]. | ||
- | \\ **3/4/2016 ** | + | \\ **3/4/2016 ** |
* **Agenda:** | * **Agenda:** | ||
* Dekker lab HiC pipeline - Bryan Lajoie | * Dekker lab HiC pipeline - Bryan Lajoie | ||
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* **Links:** | * **Links:** | ||
* [[https://docs.google.com/viewer?a=v&pid=sites&srcid=NGRudWNsZW9tZS5vcmd8NGQtbnVjbGVvbWUtd2lraXxneDo0OGIxZDFiOTQ4NmY1MmI4|Slides]]. | * [[https://docs.google.com/viewer?a=v&pid=sites&srcid=NGRudWNsZW9tZS5vcmd8NGQtbnVjbGVvbWUtd2lraXxneDo0OGIxZDFiOTQ4NmY1MmI4|Slides]]. | ||
- | * [[https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/working-groups-list/data-analysis-wg/dawg-meeting-notes-20170518|DAWG Meeting Notes 20170518]]. | + | * [[4dn:phase1:data_analysis:dawg-meeting-notes-20170518|DAWG Meeting Notes 20170518]]. |
* [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/ldr.php?RCID=179d1cdde5f4241f3b962f58f7b2c971&sa=D&sntz=1&usg=AFQjCNE942yNVAl2Sgg0mPlktnz5m3-d3w|Recording]]. | * [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/ldr.php?RCID=179d1cdde5f4241f3b962f58f7b2c971&sa=D&sntz=1&usg=AFQjCNE942yNVAl2Sgg0mPlktnz5m3-d3w|Recording]]. | ||
* [[https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/working-groups-list/data-analysis-wg/Ferrari_TADcalls.rar?attredirects=0&d=1|TAD calls.]] | * [[https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/working-groups-list/data-analysis-wg/Ferrari_TADcalls.rar?attredirects=0&d=1|TAD calls.]] | ||
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* **Links:** | * **Links:** | ||
* [[https://docs.google.com/presentation/d/1oZDoFMEFKz8JQUy-hx4roWcU_zP_9lzp2FwRuROkWEc/edit#slide=id.p|Slides]]. | * [[https://docs.google.com/presentation/d/1oZDoFMEFKz8JQUy-hx4roWcU_zP_9lzp2FwRuROkWEc/edit#slide=id.p|Slides]]. | ||
- | * [[https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/working-groups-list/data-analysis-wg/dawg-meeting-notes-20170601|DAWG Meeting Notes 20170601]]. | + | * [[4dn:phase1:data_analysis:dawg-meeting-notes-20170601|DAWG Meeting Notes 20170601]]. |
* [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/ldr.php?RCID=fc5b4225a0e391dd0ba2af58c1ff9a16&sa=D&sntz=1&usg=AFQjCNHTzMaG1VOA-T139mcvo2l8KAo1YA|Recording]]. | * [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/ldr.php?RCID=fc5b4225a0e391dd0ba2af58c1ff9a16&sa=D&sntz=1&usg=AFQjCNHTzMaG1VOA-T139mcvo2l8KAo1YA|Recording]]. | ||
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* **Links** | * **Links** | ||
* [[https://docs.google.com/viewer?a=v&pid=sites&srcid=NGRudWNsZW9tZS5vcmd8NGQtbnVjbGVvbWUtd2lraXxneDoyYzJmNzYyZjJlMWZkZTg1|Slides]]. | * [[https://docs.google.com/viewer?a=v&pid=sites&srcid=NGRudWNsZW9tZS5vcmd8NGQtbnVjbGVvbWUtd2lraXxneDoyYzJmNzYyZjJlMWZkZTg1|Slides]]. | ||
- | * [[https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/working-groups-list/data-analysis-wg/dawg-meeting-notes-20170615|DAWG Meeting Notes 20170615]]. | + | * [[4dn:phase1:data_analysis:dawg-meeting-notes-20170615|DAWG Meeting Notes 20170615]]. |
**7/13/2017** | **7/13/2017** | ||
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* **Links** | * **Links** | ||
* [[https://docs.google.com/viewer?a=v&pid=sites&srcid=NGRudWNsZW9tZS5vcmd8NGQtbnVjbGVvbWUtd2lraXxneDo2ZDgyYzEwYTdiNjEwNGUx|Arrowhead Slides]]. | * [[https://docs.google.com/viewer?a=v&pid=sites&srcid=NGRudWNsZW9tZS5vcmd8NGQtbnVjbGVvbWUtd2lraXxneDo2ZDgyYzEwYTdiNjEwNGUx|Arrowhead Slides]]. | ||
- | * [[https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/working-groups-list/data-analysis-wg/dawg-meeting-notes-20170803|DAWG Meeting Notes 20170803]]. | + | * [[4dn:phase1:data_analysis:dawg-meeting-notes-20170803|DAWG Meeting Notes 20170803]]. |
* [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/ldr.php?RCID=920d2ead6e130d3560c557271acea7cc&sa=D&sntz=1&usg=AFQjCNGyIM_k4bR0ZbsOqKYA0Sw7ORcMZQ|Recording]]. | * [[https://www.google.com/url?q=https://4dnucleome.webex.com/4dnucleome/ldr.php?RCID=920d2ead6e130d3560c557271acea7cc&sa=D&sntz=1&usg=AFQjCNGyIM_k4bR0ZbsOqKYA0Sw7ORcMZQ|Recording]]. | ||
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* Mirny Lab | * Mirny Lab | ||
* Aiden Lab | * Aiden Lab | ||
+ | |||
+ | ===== Members (original list) ===== | ||
+ | |||
+ | <font 20px/inherit;;inherit;;inherit>Co-Chairs:</font> | ||
+ | |||
+ | <font 20px/inherit;;inherit;;inherit>Peter Kharchenko, <peter_kharchenko@hms.harvard.edu> | ||
+ | William Noble, <wnoble@uw.edu></font> | ||
+ | |||
+ | <font inherit/inherit;;inherit;;#e74c3c>Insert data analysis members spreadsheet</font> | ||
+ | |||
+ | **Program Staff** | ||
+ | |||
+ | Weizhong Chen, PhD <wec125@eng.ucsd.edu> | ||
+ | |||
+ | This can be a list of all other working members in the working group. | ||
+ | |||
+ | ===== Mailing list ===== | ||
+ | |||
+ | The mailing list to use for communication in this Working Group is <analysis@4dnucleome.org>. Emails sent there will go to everyone on the list. Replying to an email from the list will also send it to everyone in the list. | ||
+ | |||
+ | ===== Calendar ===== | ||
+ | |||
+ | {{url>https://calendar.google.com/calendar/embed?src=l83jh4t35tpd46ad6dq822ck78%40group.calendar.google.com&ctz=America%2FLos_Angeles 800,400 noborder|4DN Data Analysis WG Calendar}} | ||