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4dn:phase1:working_groups:omics_data_standards:minutes-07-23-2018 [2019/02/15 09:44] rcalandrelli created |
4dn:phase1:working_groups:omics_data_standards:minutes-07-23-2018 [2025/04/22 16:21] (current) |
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===== Agenda ===== | ===== Agenda ===== | ||
- | - | + | - Discuss and vote on the DamID protocol ([[4dn:phase1:protocols:damid|see link here]]). This was presented on June 11th. |
- | + | - Discussion and vote on the Cut&Run protocol (see link here - [[https://www.google.com/url?q=https://www.nature.com/articles/nprot.2018.015.epdf?author_access_token=vf_ylGdH8oTFIbGYdyahH9RgN0jAjWel9jnR3ZoTv0NOQV_YOinFX53TT-yN_6ziKCqbazelkV5TLOcj4FgNB72aCjfEhYgiGP0HE3gHZJbRtWNmNoZwyH7Y6HToKMfQ&sa=D&sntz=1&usg=AFQjCNECGEGq02z8erEG0gwEFw9TpUF8cA|https://www.nature.com/articles/nprot.2018.015.epdf?author_access_token=vf_ylGdH8oTFIbGYdyahH9RgN0jAjWel9jnR3ZoTv0NOQV_YOinFX53TT-yN_6ziKCqbazelkV5TLOcj4FgNB72aCjfEhYgiGP0HE3gHZJbRtWNmNoZwyH7Y6HToKMfQ]]). This was presented on June 25th. | |
- | Discuss and vote on the DamID protocol (see link here - \__[[https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/protocols/damid|https://sites.google.com/a/4dnucleome.org/4d-nucleome-wiki/protocols/damid]]). This was presented on June 11th. | + | - Allele-specific alignment of HiC reads. \__(Burak Alver). |
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- | Discussion and vote on the Cut&Run protocol (see link here - [[https://www.google.com/url?q=https://www.nature.com/articles/nprot.2018.015.epdf?author_access_token=vf_ylGdH8oTFIbGYdyahH9RgN0jAjWel9jnR3ZoTv0NOQV_YOinFX53TT-yN_6ziKCqbazelkV5TLOcj4FgNB72aCjfEhYgiGP0HE3gHZJbRtWNmNoZwyH7Y6HToKMfQ&sa=D&sntz=1&usg=AFQjCNECGEGq02z8erEG0gwEFw9TpUF8cA|https://www.nature.com/articles/nprot.2018.015.epdf?author_access_token=vf_ylGdH8oTFIbGYdyahH9RgN0jAjWel9jnR3ZoTv0NOQV_YOinFX53TT-yN_6ziKCqbazelkV5TLOcj4FgNB72aCjfEhYgiGP0HE3gHZJbRtWNmNoZwyH7Y6HToKMfQ]]). This was presented on June 25th. | + | |
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- | Allele-specific alignment of HiC reads. \__(Burak Alver). | + | |
===== DamID Protocol ===== | ===== DamID Protocol ===== |