4DN Google Drive folder: https://drive.google.com/drive/folders/1Q1mzBETKDLLnMviloMVGCieBNNqKbP36?usp=sharing

Scientific Webinar Calendar: click here to add all the Scientific Webinar events to your personal calendar

Scientific Webinar Assignments (2021-2024): docs.google.com/spreadsheets/d/122eouLgJtMoCJNKmNhygufdU1qqEy-dDomxqqyQ1TxM/edit?usp=sharing

The 4DN Consortium Scientific Webinar Series is designed to promote sharing ideas and establishment of new collaborations among the consortium members. It features scientific presentations by 4DN member group. These presentations are focused on new discoveries, and new approaches and are not meant to be high-level summaries of deliverables/objectives of each project as in annual consortium meetings. Each group is strongly encouraged to present unpublished research. The PI of each member group may designate either themselves or members of their group to give the presentation.

The format of this webinar series will consist of hour-long online video conferences. Each Webinar will feature two presentations, with each presentation allocated 20’ of talk time followed by 10’ of discussion. All member groups of 4DN consortium are expected to present once in this round, although some centers may present twice given the size of their grants.

The Webinar organization committee has discussed and come up with a schedule for presentations after February 2021. See the schedule here: Scientific Webinar Assignment 2021-2024.

The schedule is ranked by funded project and the corresponding PI's last name. While the corresponding PI is put in the presentation slot, it is up to the corresponding PI to decide who in their team is to give the talk. It is encouraged that trainees are given the chance to present. If the corresponding PI wants to switch with someone else on the list in a mutual agreement, then she/he has the responsibility to arrange it and let the Webinar organization committee know.

Scientific Webinar Committee: Ana Pombo, Golnaz Vahedi, Sheng Zhong, Ting Wang, Wenbo Li, Sui Huang, Yin Shen, Taekjip Ha

August 26, 2022

Moderator: Golnaz Vahedi

Presenter: Xueqiu Lin (Stanford University) - “Nested Enhancer Epistasis Networks Link Multiple Non-coding Variants to Disease Risk” (Link to presenter slides)

Presenter: Vahid Ebrahimi (University of Central Florida) - “Deep learning enables gentle 5D STED imaging” (Link to presenter slides)

• Scientific Webinar presentations (Phase 1) can be found here.
• Scientific Webinar presentations (Phase 2) can be found here.

August 26, 2022

8:00-8:30 am Pacific Time, 20 minutes talk, then 10 minutes Q&A

Xueqiu Lin

Postdoc

xqlin@stanford.edu

Title: “Nested Enhancer Epistasis Networks Link Multiple Non-coding Variants to Disease Risk ”

Xueqiu Lin is a postdoctoral scholar in Dr. Stanley Lei Qi’s lab at Stanford University. Her research focuses on combining high-throughput engineering approaches with computational methods to study the function of enhancer regulatory networks in controlling genes. Her research has led to the development of novel computational models that link multiple non-coding genetic variants to understanding complex disease.

8:30-9:00 am Pacific Time, 20 minutes talk, then 10 minutes Q&A

Vahid Ebrahimi

PhD candidate

v.ebrahimi@knights.ucf.edu

Title: “Deep learning enables gentle 5D STED imaging”

Vahid Ebrahimi is a PhD candidate at the University of Central Florida. He completed his B.Sc. and M.Sc. in Electrical Engineering at the University of Tehran. He then joined the lab of Dr. Kyu Young Han in the College of Optics and Photonics (CREOL) at the University of Central Florida, where he works on new experimental and computational techniques for high throughput and high resolution sub-cellular imaging. His PhD thesis work focuses on the applications of deep learning in super-resolution live cell microscopy.

The Webinar Series will be on the 4th Friday of each month from 8am-9am Pacific Time, 11am-12pm Eastern Time.

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During Presentation:

ATTENDEES, PLEASE:

• MUTE YOUR COMPUTER MICROPHONE WHEN JOINING THE WEBINAR

• LET THE MODERATOR KNOW THAT YOU HAVE A QUESTION VIA CHAT

• QUESTIONS WILL BE ADDRESSED AT THE END OF EACH PRESENTATION, DURING THE DISCUSSION PERIODS

Next Scientific Webinar Presentation

When: September 23, 2022

Moderator: Ana Pombo

• Member from Lacramiora Bintu (contact) Alistair Boettiger's group (Presenter and title will be determined by group)
• Member from Job Dekker (contact) Leonid Mirny's group (Presenter and title will be determined by group)